If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ), 'gf_id' => 'HOM05D000559', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000559' ), 'data_identifier' => 'HOM05D000559', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000559', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '985', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p16020' => 'bna', 'A03p17570' => 'bna', 'A03p28890' => 'bna', 'A04p02180' => 'bna', 'A04p24300' => 'bna', 'A05p14210' => 'bna', 'A07p24670' => 'bna', 'A07p33410' => 'bna', 'A07p35540' => 'bna', 'A08p36170' => 'bna', 'A09p47080' => 'bna', 'A09p51740' => 'bna', 'A09p51760' => 'bna', 'A10p02170' => 'bna', 'A10p04650' => 'bna', 'A10p09660' => 'bna', 'Aa31LG10G13800' => 'aar', 'Aa31LG1G8230' => 'aar', 'Aa31LG2G3100' => 'aar', 'Aa31LG3G8270' => 'aar', 'Aa31LG5G5570' => 'aar', 'Aa31LG9G11740' => 'aar', 'Aa31sc367G30' => 'aar', 'Aa31sc516G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1247' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.961' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1396' => 'aag', 'Actinidia11298' => 'ach', 'Actinidia11299' => 'ach', 'Actinidia13541' => 'ach', 'Actinidia17224' => 'ach', 'Actinidia19909' => 'ach', 'Actinidia19910' => 'ach', 'Actinidia26508' => 'ach', 'Actinidia29144' => 'ach', 'Actinidia31799' => 'ach', 'Actinidia31934' => 'ach', 'Actinidia34596' => 'ach', 'Ah.03g138810' => 'amhyb', 'Ah.07g202190' => 'amhyb', 'Ah.08g214640' => 'amhyb', 'Ah.11g039520' => 'amhyb', 'Ah.13g067800' => 'amhyb', 'Ah.16g101230' => 'amhyb', 'AL1G15970' => 'aly', 'AL1G15980' => 'aly', 'AL2G24240' => 'aly', 'AL2G28290' => 'aly', 'AL4G26640' => 'aly', 'AL5G35100' => 'aly', 'AL5G35110' => 'aly', 'AL5G41390' => 'aly', 'AL6G44092' => 'aly', 'AL8G26120' => 'aly', 'AL8G29990' => 'aly', 'Aqoxy1G00755' => 'aox', 'Aqoxy2G00127' => 'aox', 'Aqoxy2G00840' => 'aox', 'Aqoxy3G00099' => 'aox', 'Aqoxy3G00476' => 'aox', 'Aqoxy3G01072' => 'aox', 'Aqoxy5G00330' => 'aox', 'Aqoxy6G03036' => 'aox', 'Aqoxy7G00499' => 'aox', 'Aqoxy7G00583' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0LC3F6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1PEU5R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HH6BD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4ZP1HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6Z9DWY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7E26QE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7VB1JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8I3UN2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E80PU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FS0NK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3H8HA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G665UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P1Z684' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QPXD55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2UT08' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R9446Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4R686' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6KNH1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YQ4PGW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2UEVW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6UM0T' => 'arhy', 'AT1G06020' => 'ath', 'AT1G06030' => 'ath', 'AT1G50390' => 'ath', 'AT1G66430' => 'ath', 'AT1G69200' => 'ath', 'AT2G31390' => 'ath', 'AT3G54090' => 'ath', 'AT3G59480' => 'ath', 'AT4G10260' => 'ath', 'AT5G51830' => 'ath', 'ATR0314G032' => 'atr', 'ATR0564G090' => 'atr', 'ATR0618G200' => 'atr', 'ATR0618G368' => 'atr', 'ATR0661G263' => 'atr', 'ATR0691G052' => 'atr', 'ATR0691G298' => 'atr', 'ATR0743G209' => 'atr', 'ATR0813G001' => 'atr', 'ATR0827G181' => 'atr', 'Atru.chr1.1844' => 'acertr', 'Atru.chr11.1604' => 'acertr', 'Atru.chr11.1605' => 'acertr', 'Atru.chr13.2645' => 'acertr', 'Atru.chr3.1620' => 'acertr', 'Atru.chr4.1239' => 'acertr', 'Atru.chr5.367' => 'acertr', 'Atru.chr5.368' => 'acertr', 'Atru.chr8.2127' => 'acertr', 'AUR62001136' => 'cqu', 'AUR62002324' => 'cqu', 'AUR62002325' => 'cqu', 'AUR62003083' => 'cqu', 'AUR62007900' => 'cqu', 'AUR62011859' => 'cqu', 'AUR62016061' => 'cqu', 'AUR62016543' => 'cqu', 'AUR62021269' => 'cqu', 'AUR62023179' => 'cqu', 'AUR62023180' => 'cqu', 'AUR62023226' => 'cqu', 'AUR62023862' => 'cqu', 'AUR62034974' => 'cqu', 'AUR62039342' => 'cqu', 'BcaB01g00221' => 'bca', 'BcaB01g02761' => 'bca', 'BcaB01g04155' => 'bca', 'BcaB02g07461' => 'bca', 'BcaB02g08222' => 'bca', 'BcaB02g10388' => 'bca', 'BcaB03g13439' => 'bca', 'BcaB03g15268' => 'bca', 'BcaB03g15879' => 'bca', 'BcaB03g15881' => 'bca', 'BcaB06g28550' => 'bca', 'BcaB08g35535' => 'bca', 'BcaC01g04688' => 'bca', 'BcaC01g05954' => 'bca', 'BcaC01g06139' => 'bca', 'BcaC02g10055' => 'bca', 'BcaC02g11239' => 'bca', 'BcaC03g13127' => 'bca', 'BcaC03g13131' => 'bca', 'BcaC04g20629' => 'bca', 'BcaC05g24314' => 'bca', 'BcaC05g28514' => 'bca', 'BcaC07g36815' => 'bca', 'BcaC07g40475' => 'bca', 'BcaC07g40477' => 'bca', 'BcaC07g42090' => 'bca', 'BcaC08g44308' => 'bca', 'BcaC08g46054' => 'bca', 'BcaC08g46371' => 'bca', 'BcaC09g50210' => 'bca', 'BcaNung05944' => 'bca', 'BcaNung05945' => 'bca', 'BolC2t06165H' => 'bol', 'BolC2t06171H' => 'bol', 'BolC3t14275H' => 'bol', 'BolC3t14454H' => 'bol', 'BolC3t15803H' => 'bol', 'BolC4t23424H' => 'bol', 'BolC4t24881H' => 'bol', 'BolC4t24904H' => 'bol', 'BolC4t27598H' => 'bol', 'BolC5t29206H' => 'bol', 'BolC5t31615H' => 'bol', 'BolC6t37784H' => 'bol', 'BolC6t39068H' => 'bol', 'BolC6t39361H' => 'bol', 'BolC8t47027H' => 'bol', 'BolC8t50535H' => 'bol', 'BolC8t51048H' => 'bol', 'BolC8t51050H' => 'bol', 'BolC9t57007H' => 'bol', 'BraA03t10893Z' => 'bra', 'BraA03t11025Z' => 'bra', 'BraA03t12087Z' => 'bra', 'BraA03t15187Z' => 'bra', 'BraA04t15945Z' => 'bra', 'BraA04t17949Z' => 'bra', 'BraA05t20352Z' => 'bra', 'BraA07t30112Z' => 'bra', 'BraA07t30968Z' => 'bra', 'BraA07t31142Z' => 'bra', 'BraA08t35523Z' => 'bra', 'BraA09t40170Z' => 'bra', 'BraA09t40610Z' => 'bra', 'BraA10t42730Z' => 'bra', 'BraA10t43047Z' => 'bra', 'C02p56270' => 'bna', 'C03p14870' => 'bna', 'C03p18850' => 'bna', 'C03p20690' => 'bna', 'C03p34920' => 'bna', 'C04p18940' => 'bna', 'C04p33220' => 'bna', 'C04p33430' => 'bna', 'C04p61130' => 'bna', 'C05p04310' => 'bna', 'C05p28930' => 'bna', 'C06p17320' => 'bna', 'C06p26210' => 'bna', 'C06p39810' => 'bna', 'C06p40710' => 'bna', 'C08p02350' => 'bna', 'C08p10770' => 'bna', 'C08p29330' => 'bna', 'C08p34470' => 'bna', 'C08p34490' => 'bna', 'C08p51460' => 'bna', 'C09p41320' => 'bna', 'CAN.G1061.43' => 'can', 'CAN.G1182.4' => 'can', 'CAN.G1327.7' => 'can', 'CAN.G1752.1' => 'can', 'CAN.G321.29' => 'can', 'CAN.G65.164' => 'can', 'CAN.G707.20' => 'can', 'CAN.G92.16' => 'can', 'CAN.G968.6' => 'can', 'CANSAT21G2204' => 'cansat', 'CANSAT35G1207' => 'cansat', 'CANSAT56G0948' => 'cansat', 'CANSAT56G3609' => 'cansat', 'CANSAT56G3968' => 'cansat', 'CANSAT78G0951' => 'cansat', 'CANSAT78G1887' => 'cansat', 'CARHR005540' => 'chi', 'CARHR005550' => 'chi', 'CARHR058420' => 'chi', 'CARHR062080' => 'chi', 'CARHR125020' => 'chi', 'CARHR163980' => 'chi', 'CARHR169860' => 'chi', 'CARHR256600' => 'chi', 'CARHR264710' => 'chi', 'Carub.0001s0536' => 'cru', 'Carub.0002s1247' => 'cru', 'Carub.0002s1579' => 'cru', 'Carub.0004s1271' => 'cru', 'Carub.0005s2068' => 'cru', 'Carub.0005s2621' => 'cru', 'Carub.0006s2881' => 'cru', 'Carub.0008s1185' => 'cru', 'Ca_01255_v3' => 'car', 'Ca_04999_v3' => 'car', 'Ca_05786_v3' => 'car', 'Ca_09899_v3' => 'car', 'Ca_10814_v3' => 'car', 'Ca_16685_v3' => 'car', 'Ca_20101_v3' => 'car', 'Ca_20793_v3' => 'car', 'Ca_30987_v3' => 'car', 'CBR_g12046' => 'cbr', 'CBR_g24152' => 'cbr', 'CBR_g3800' => 'cbr', 'CBR_g3802' => 'cbr', 'Cc02_g03600' => 'ccan', 'Cc02_g36990' => 'ccan', 'Cc06_g01810' => 'ccan', 'Cc07_g08070' => 'ccan', 'Cc07_g21290' => 'ccan', 'Cc10_g16260' => 'ccan', 'Cc11_g11820' => 'ccan', 'CDE02G1516' => 'cde', 'CDE04G0712' => 'cde', 'CDE04G2201' => 'cde', 'CDE04G2516' => 'cde', 'CDE04G3058' => 'cde', 'CDE07G0162' => 'cde', 'CDE07G0807' => 'cde', 'CDE07G1386' => 'cde', 'CDE09G0093' => 'cde', 'CDE11G0674' => 'cde', 'Cfa001817' => 'cfa', 'Cfa008028' => 'cfa', 'Cfa008864' => 'cfa', 'Cfa015177' => 'cfa', 'Cfa017270' => 'cfa', 'Cfa020093' => 'cfa', 'Ciclev10005308m.g' => 'ccl', 'Ciclev10011546m.g' => 'ccl', 'Ciclev10011551m.g' => 'ccl', 'Ciclev10020949m.g' => 'ccl', 'Ciclev10021105m.g' => 'ccl', 'Ciclev10021154m.g' => 'ccl', 'Ciclev10023850m.g' => 'ccl', 'Ciclev10031077m.g' => 'ccl', 'CiPaw.01G098500' => 'cil', 'CiPaw.02G054000' => 'cil', 'CiPaw.03G010900' => 'cil', 'CiPaw.03G069800' => 'cil', 'CiPaw.03G100100' => 'cil', 'CiPaw.04G046400' => 'cil', 'CiPaw.05G123900' => 'cil', 'CiPaw.09G204600' => 'cil', 'ClCG01G005330' => 'cla', 'ClCG04G000590' => 'cla', 'ClCG05G011020' => 'cla', 'ClCG06G000890' => 'cla', 'ClCG10G021710' => 'cla', 'COL.COLO4_12978' => 'col', 'COL.COLO4_14227' => 'col', 'COL.COLO4_14634' => 'col', 'COL.COLO4_15736' => 'col', 'COL.COLO4_16176' => 'col', 'COL.COLO4_16177' => 'col', 'COL.COLO4_27859' => 'col', 'Cpa.g.c30125' => 'cpa', 'Cpa.g.c43122' => 'cpa', 'Cpa.g.sc1.150' => 'cpa', 'Cpa.g.sc116.34' => 'cpa', 'Cpa.g.sc21.231' => 'cpa', 'Cpa.g.sc21.232' => 'cpa', 'Cpa.g.sc56.93' => 'cpa', 'Cpa.g.sc9.297' => 'cpa', 'Cre13.g561850' => 'cre', 'CsaV3_3G021590' => 'csa', 'CsaV3_3G034260' => 'csa', 'CsaV3_4G031430' => 'csa', 'CsaV3_5G005580' => 'csa', 'CsaV3_6G006740' => 'csa', 'CSS0000483' => 'camsi', 'CSS0001546' => 'camsi', 'CSS0004917' => 'camsi', 'CSS0006539' => 'camsi', 'CSS0009514' => 'camsi', 'CSS0029938' => 'camsi', 'CSS0031541' => 'camsi', 'CSS0033683' => 'camsi', 'CSS0033776' => 'camsi', 'CSS0034826' => 'camsi', 'CSS0040397' => 'camsi', 'CSS0045422' => 'camsi', 'CSS0045652' => 'camsi', 'CSS0047381' => 'camsi', 'CSS0048497' => 'camsi', 'DCAR_018140' => 'dca', 'DCAR_018739' => 'dca', 'DCAR_020209' => 'dca', 'DCAR_023945' => 'dca', 'DCAR_023946' => 'dca', 'DCAR_024129' => 'dca', 'DCAR_028446' => 'dca', 'Dinv12502' => 'din', 'Dinv14887' => 'din', 'Dinv16360' => 'din', 'Dinv20153' => 'din', 'Dinv20154' => 'din', 'Dinv22081' => 'din', 'Dinv22747' => 'din', 'Dinv28509' => 'din', 'Dinv32407' => 'din', 'Dinv34053' => 'din', 'Dinv35138' => 'din', 'Dinv37093' => 'din', 'Dinv42268' => 'din', 'Dinv44180' => 'din', 'Duzib068G0457' => 'dzi', 'Duzib084G0487' => 'dzi', 'Duzib128G1025' => 'dzi', 'Duzib132G0956' => 'dzi', 'Duzib133G0871' => 'dzi', 'Duzib138G0114' => 'dzi', 'Duzib151G1120' => 'dzi', 'Duzib175G0001' => 'dzi', 'Duzib205G1292' => 'dzi', 'Duzib212G0129' => 'dzi', 'Duzib251G0905' => 'dzi', 'Duzib268G0431' => 'dzi', 'Duzib268G1162' => 'dzi', 'ECA232G1213' => 'eca', 'ECA232G4154' => 'eca', 'ECA234G0047' => 'eca', 'ECA238G0963' => 'eca', 'ECA238G1776' => 'eca', 'ECA246G4947' => 'eca', 'ECA248G0630' => 'eca', 'ECA248G2426' => 'eca', 'EL10Ac2g04469' => 'bvu', 'EL10Ac3g05743' => 'bvu', 'EL10Ac3g05980' => 'bvu', 'EL10Ac6g15017' => 'bvu', 'EL10Ac7g17914' => 'bvu', 'EL10Ac8g20482' => 'bvu', 'Eucgr.A00095' => 'egr', 'Eucgr.A02848' => 'egr', 'Eucgr.A02851' => 'egr', 'Eucgr.B03142' => 'egr', 'Eucgr.F02835' => 'egr', 'Eucgr.K00187' => 'egr', 'Eucgr.K03004' => 'egr', 'FAN01G1181' => 'fan', 'FAN01G2369' => 'fan', 'FAN02G0741' => 'fan', 'FAN03G1916' => 'fan', 'FAN03G2989' => 'fan', 'FAN03G3252' => 'fan', 'FAN05G4006' => 'fan', 'FAN06G0457' => 'fan', 'FAN06G2796' => 'fan', 'FAN06G2834' => 'fan', 'FAN06G3764' => 'fan', 'FAN07G0190' => 'fan', 'FAN07G0455' => 'fan', 'FAN09G4162' => 'fan', 'FAN10G0284' => 'fan', 'FAN10G2172' => 'fan', 'FAN10G2273' => 'fan', 'FAN12G2753' => 'fan', 'FAN12G3939' => 'fan', 'FAN14G0236' => 'fan', 'FAN15G1117' => 'fan', 'FAN17G1834' => 'fan', 'FAN17G2916' => 'fan', 'FAN19G2201' => 'fan', 'FAN19G2609' => 'fan', 'FAN19G2831' => 'fan', 'FAN20G1919' => 'fan', 'FAN22G1181' => 'fan', 'FAN23G0279' => 'fan', 'FAN23G1598' => 'fan', 'FAN24G1700' => 'fan', 'FAN24G2389' => 'fan', 'FAN26G0134' => 'fan', 'FAN26G1324' => 'fan', 'FAN26G3187' => 'fan', 'FAN28G0710' => 'fan', 'FvH4_1g23010' => 'fve', 'FvH4_1g23020' => 'fve', 'FvH4_1g28890' => 'fve', 'FvH4_2g00080' => 'fve', 'FvH4_2g01390' => 'fve', 'FvH4_4g10860' => 'fve', 'FvH4_4g29720' => 'fve', 'FvH4_6g12270' => 'fve', 'FvH4_7g12690' => 'fve', 'FvH4_7g28710' => 'fve', 'Glyma.01G062100' => 'gma', 'Glyma.01G109700' => 'gma', 'Glyma.02G120300' => 'gma', 'Glyma.02G245800' => 'gma', 'Glyma.03G074800' => 'gma', 'Glyma.09G148900' => 'gma', 'Glyma.09G266300' => 'gma', 'Glyma.10G176900' => 'gma', 'Glyma.10G240800' => 'gma', 'Glyma.11G127200' => 'gma', 'Glyma.12G051800' => 'gma', 'Glyma.13G344500' => 'gma', 'Glyma.14G215900' => 'gma', 'Glyma.15G029800' => 'gma', 'Glyma.16G200600' => 'gma', 'Glyma.18G224402' => 'gma', 'Glyma.20G153900' => 'gma', 'Glyma.20G213300' => 'gma', 'Gohir.A07G077200' => 'ghi', 'Gohir.A07G201500' => 'ghi', 'Gohir.A09G162800' => 'ghi', 'Gohir.A09G179300' => 'ghi', 'Gohir.A09G211625' => 'ghi', 'Gohir.A10G138400' => 'ghi', 'Gohir.A12G160200' => 'ghi', 'Gohir.A12G262300' => 'ghi', 'Gohir.D01G083200' => 'ghi', 'Gohir.D07G081900' => 'ghi', 'Gohir.D07G207800' => 'ghi', 'Gohir.D09G158300' => 'ghi', 'Gohir.D09G174600' => 'ghi', 'Gohir.D09G205100' => 'ghi', 'Gohir.D10G128400' => 'ghi', 'Gohir.D12G163600' => 'ghi', 'Gohir.D12G263000' => 'ghi', 'Gorai.001G087000' => 'gra', 'Gorai.001G234200' => 'gra', 'Gorai.004G110300' => 'gra', 'Gorai.006G180000' => 'gra', 'Gorai.006G196700' => 'gra', 'Gorai.006G229100' => 'gra', 'Gorai.007G254000' => 'gra', 'Gorai.008G176200' => 'gra', 'Gorai.008G281900' => 'gra', 'Gorai.011G141600' => 'gra', 'GSVIVG01010790001' => 'vvi', 'GSVIVG01012237001' => 'vvi', 'GSVIVG01018449001' => 'vvi', 'GSVIVG01027578001' => 'vvi', 'GSVIVG01030838001' => 'vvi', 'GSVIVG01034028001' => 'vvi', 'GSVIVG01037102001' => 'vvi', 'HanXRQChr01g0023821' => 'han', 'HanXRQChr04g0105761' => 'han', 'HanXRQChr06g0170451' => 'han', 'HanXRQChr07g0206731' => 'han', 'HanXRQChr09g0266931' => 'han', 'HanXRQChr11g0343711' => 'han', 'HanXRQChr13g0406551' => 'han', 'HanXRQChr14g0440331' => 'han', 'Haze_11887' => 'cav', 'Haze_13792' => 'cav', 'Haze_14028' => 'cav', 'Haze_14235' => 'cav', 'Haze_16713' => 'cav', 'Haze_20929' => 'cav', 'Hma1.2p1_0033F.1_g020770' => 'hma', 'Hma1.2p1_0050F.1_g029200' => 'hma', 'Hma1.2p1_0283F.1_g113460' => 'hma', 'Hma1.2p1_0324F.1_g125480' => 'hma', 'Hma1.2p1_0488F.1_g163930' => 'hma', 'Hma1.2p1_0566F.1_g179930' => 'hma', 'Hma1.2p1_0763F.1_g214470' => 'hma', 'HPP92_001485' => 'vpl', 'HPP92_002033' => 'vpl', 'HPP92_002742' => 'vpl', 'HPP92_007335' => 'vpl', 'HPP92_019173' => 'vpl', 'HPP92_023714' => 'vpl', 'HPP92_023715' => 'vpl', 'HPP92_026954' => 'vpl', 'HPP92_027493' => 'vpl', 'Hund03169' => 'sun', 'Hund04684' => 'sun', 'Hund05264' => 'sun', 'Hund05550' => 'sun', 'Hund12015' => 'sun', 'Hund16212' => 'sun', 'Lalb_Chr01g0003131' => 'lal', 'Lalb_Chr02g0149871' => 'lal', 'Lalb_Chr03g0026071' => 'lal', 'Lalb_Chr04g0255561' => 'lal', 'Lalb_Chr04g0255571' => 'lal', 'Lalb_Chr06g0160881' => 'lal', 'Lalb_Chr06g0168801' => 'lal', 'Lalb_Chr06g0168811' => 'lal', 'Lalb_Chr10g0104451' => 'lal', 'Lalb_Chr13g0291351' => 'lal', 'Lalb_Chr17g0341311' => 'lal', 'Lalb_Chr19g0127201' => 'lal', 'Lalb_Chr19g0131151' => 'lal', 'Lalb_Chr22g0352101' => 'lal', 'Lj1A988T31' => 'lonja', 'Lj2A434G48' => 'lonja', 'Lj2g0001921' => 'lja', 'Lj2g0016905' => 'lja', 'Lj3A24G14' => 'lonja', 'Lj3A958T73' => 'lonja', 'Lj3g0001618' => 'lja', 'Lj3g0004470' => 'lja', 'Lj3g0008394' => 'lja', 'Lj3g0021662' => 'lja', 'Lj5g0005124' => 'lja', 'Lj5g0024433' => 'lja', 'Lj6A777T42' => 'lonja', 'Lj7A414T46' => 'lonja', 'Lj7C524T14' => 'lonja', 'LjContig00141g0006487' => 'lja', 'LjContig00141g0012870' => 'lja', 'LjContig00141g0013885' => 'lja', 'Lsat_1_v5_gn_1_77921' => 'lsa', 'Lsat_1_v5_gn_2_130100' => 'lsa', 'Lsat_1_v5_gn_2_79920' => 'lsa', 'Lsat_1_v5_gn_2_85360' => 'lsa', 'Lsat_1_v5_gn_3_53720' => 'lsa', 'Lsat_1_v5_gn_4_132241' => 'lsa', 'Lsat_1_v5_gn_4_37361' => 'lsa', 'Lsat_1_v5_gn_4_7721' => 'lsa', 'Lsat_1_v5_gn_4_96461' => 'lsa', 'Lsat_1_v5_gn_5_154220' => 'lsa', 'Lsat_1_v5_gn_6_109880' => 'lsa', 'Lsat_1_v5_gn_8_84721' => 'lsa', 'Lsat_1_v5_gn_9_52921' => 'lsa', 'Manes.01G026700' => 'mes', 'Manes.01G116600' => 'mes', 'Manes.01G263700' => 'mes', 'Manes.02G075300' => 'mes', 'Manes.04G043700' => 'mes', 'Manes.06G141400' => 'mes', 'Manes.09G100784' => 'mes', 'Manes.11G121800' => 'mes', 'Manes.15G189700' => 'mes', 'Mapoly0043s0096' => 'mpo', 'Mapoly0051s0110' => 'mpo', 'MBI03_g28849_MAGBIO' => 'mbi', 'MBI04_g35066_MAGBIO' => 'mbi', 'MBI05_g03762_MAGBIO' => 'mbi', 'MBI08_g09973_MAGBIO' => 'mbi', 'MBI08_g47047_MAGBIO' => 'mbi', 'MBI11_g11984_MAGBIO' => 'mbi', 'MBI11_g36365_MAGBIO' => 'mbi', 'MBI12_g40235_MAGBIO' => 'mbi', 'MBI16_g03097_MAGBIO' => 'mbi', 'MBI17_g21893_MAGBIO' => 'mbi', 'MBI17_g42349_MAGBIO' => 'mbi', 'MCO12G386' => 'mco', 'MD00G1004100' => 'mdo', 'MD01G1193000' => 'mdo', 'MD02G1197500' => 'mdo', 'MD04G1042400' => 'mdo', 'MD04G1144300' => 'mdo', 'MD04G1144400' => 'mdo', 'MD07G1123500' => 'mdo', 'MD09G1262800' => 'mdo', 'MD12G1158400' => 'mdo', 'MD13G1060100' => 'mdo', 'MD15G1307900' => 'mdo', 'MD17G1257700' => 'mdo', 'MD17G1267100' => 'mdo', 'Medtr0046s0180' => 'mtr', 'Medtr0046s0210' => 'mtr', 'Medtr1g051220' => 'mtr', 'Medtr1g054730' => 'mtr', 'Medtr1g055355' => 'mtr', 'Medtr1g057810' => 'mtr', 'Medtr1g069490' => 'mtr', 'Medtr1g069745' => 'mtr', 'Medtr1g076850' => 'mtr', 'Medtr1g101950' => 'mtr', 'Medtr1g105150' => 'mtr', 'Medtr2g098950' => 'mtr', 'Medtr4g019165' => 'mtr', 'Medtr4g067310' => 'mtr', 'Medtr5g044990' => 'mtr', 'Medtr5g079460' => 'mtr', 'Medtr6g089480' => 'mtr', 'Medtr7g075860' => 'mtr', 'MELO3C005395.2' => 'cme', 'MELO3C009032.2' => 'cme', 'MELO3C009200.2' => 'cme', 'MELO3C020278.2' => 'cme', 'MELO3C022452.2' => 'cme', 'Migut.C00845' => 'egut', 'Migut.F01161' => 'egut', 'Migut.G00999' => 'egut', 'Migut.H00276' => 'egut', 'Migut.L01175' => 'egut', 'Migut.L01986' => 'egut', 'Migut.N03103' => 'egut', 'MSTRG.17221' => 'ama', 'MSTRG.20779' => 'ama', 'MSTRG.22004' => 'ama', 'MSTRG.26792' => 'ama', 'MSTRG.770' => 'ama', 'MSTRG.8428' => 'ama', 'MSTRG.9760' => 'ama', 'Nitab4.5_0000008g0450' => 'nta', 'Nitab4.5_0000079g0020' => 'nta', 'Nitab4.5_0000231g0030' => 'nta', 'Nitab4.5_0000599g0050' => 'nta', 'Nitab4.5_0001127g0150' => 'nta', 'Nitab4.5_0001376g0030' => 'nta', 'Nitab4.5_0001573g0010' => 'nta', 'Nitab4.5_0002553g0020' => 'nta', 'Nitab4.5_0002664g0050' => 'nta', 'Nitab4.5_0003356g0010' => 'nta', 'Nitab4.5_0004983g0020' => 'nta', 'Nitab4.5_0006526g0020' => 'nta', 'Nitab4.5_0007596g0010' => 'nta', 'Nitab4.5_0007734g0020' => 'nta', 'Nitab4.5_0009638g0010' => 'nta', 'Nitab4.5_0010853g0010' => 'nta', 'Nn1g01286' => 'nnu', 'Nn1g09642' => 'nnu', 'Nn2g11333' => 'nnu', 'Nn3g18253' => 'nnu', 'Nn4g23479' => 'nnu', 'Nn5g27156' => 'nnu', 'Oeu000911.1' => 'oeu', 'Oeu003356.1' => 'oeu', 'Oeu004607.1' => 'oeu', 'Oeu022532.1' => 'oeu', 'Oeu024231.1' => 'oeu', 'Oeu030255.2' => 'oeu', 'Oeu034451.1' => 'oeu', 'Oeu044373.1' => 'oeu', 'Oeu047406.1' => 'oeu', 'Oeu053822.1' => 'oeu', 'Os01g0851000' => 'osa', 'Os01g0894300' => 'osa', 'Os03g0602600' => 'osa', 'Os06g0232200' => 'osa', 'Os08g0113100' => 'osa', 'Peaxi162Scf00008g01622' => 'pax', 'Peaxi162Scf00078g01221' => 'pax', 'Peaxi162Scf00126g00622' => 'pax', 'Peaxi162Scf00126g00625' => 'pax', 'Peaxi162Scf00175g00529' => 'pax', 'Peaxi162Scf00180g00711' => 'pax', 'Peaxi162Scf00192g00521' => 'pax', 'Peaxi162Scf00427g00618' => 'pax', 'Peaxi162Scf00427g00622' => 'pax', 'Peaxi162Scf02113g00016' => 'pax', 'PGR004G1150' => 'pgr', 'PGR042G1079' => 'pgr', 'PGR042G1138' => 'pgr', 'PGR042G2739' => 'pgr', 'PGR083G1653' => 'pgr', 'PGR102G2894' => 'pgr', 'PGSC0003DMG400010277' => 'stu', 'PGSC0003DMG400020361' => 'stu', 'PGSC0003DMG400024246' => 'stu', 'PGSC0003DMG400026916' => 'stu', 'PGSC0003DMG400028311' => 'stu', 'PGSC0003DMG400030653' => 'stu', 'Phvul.003G040700' => 'pvu', 'Phvul.004G123400' => 'pvu', 'Phvul.005G153300' => 'pvu', 'Phvul.007G065200' => 'pvu', 'Phvul.007G113500' => 'pvu', 'Phvul.008G073900' => 'pvu', 'Phvul.008G234800' => 'pvu', 'Phvul.010G006700' => 'pvu', 'Phvul.011G053800' => 'pvu', 'Potri.004G089300' => 'ptr', 'Potri.007G129700' => 'ptr', 'Potri.008G097300' => 'ptr', 'Potri.012G132700' => 'ptr', 'Potri.014G074125' => 'ptr', 'Potri.014G074150' => 'ptr', 'Potri.015G134900' => 'ptr', 'Potri.016G109600' => 'ptr', 'Potri.017G029000' => 'ptr', 'Potri.017G126300' => 'ptr', 'Potri.019G063600' => 'ptr', 'Pp3c13_6840' => 'ppa', 'Pp3c14_11570' => 'ppa', 'Pp3c16_4030' => 'ppa', 'Pp3c17_7270' => 'ppa', 'Pp3c1_32570' => 'ppa', 'Pp3c21_5300' => 'ppa', 'Pp3c22_7170' => 'ppa', 'Pp3c27_4840' => 'ppa', 'Pp3c2_29570' => 'ppa', 'Pp3c6_24560' => 'ppa', 'Prupe.1G196700' => 'ppe', 'Prupe.1G289300' => 'ppe', 'Prupe.2G151100' => 'ppe', 'Prupe.2G287100' => 'ppe', 'Prupe.3G160500' => 'ppe', 'Prupe.6G141700' => 'ppe', 'Prupe.6G268800' => 'ppe', 'Prupe.8G000700' => 'ppe', 'Psat0s905g0160' => 'psa', 'Psat1g111680' => 'psa', 'Psat1g197560' => 'psa', 'Psat2g041960' => 'psa', 'Psat2g131680' => 'psa', 'Psat5g185320' => 'psa', 'Psat5g289360' => 'psa', 'Psat6g112400' => 'psa', 'Psat7g021760' => 'psa', 'Psat7g169280' => 'psa', 'Psat7g243520' => 'psa', 'PSO017G0012' => 'pso', 'PSO017G2655' => 'pso', 'PSO017G4436' => 'pso', 'PSO063G4869' => 'pso', 'PSO210G1871' => 'pso', 'PSO210G3994' => 'pso', 'PSO339G4176' => 'pso', 'PSO339G4286' => 'pso', 'PSO384G2184' => 'pso', 'PSO421G0369' => 'pso', 'PSO478G1657' => 'pso', 'PSO478G4337' => 'pso', 'PSO478G4403' => 'pso', 'PSO566G0131' => 'pso', 'PSO585G0003' => 'pso', 'PSO675G1112' => 'pso', 'PSO675G3838' => 'pso', 'PSO675G4456' => 'pso', 'PSO675G5894' => 'pso', 'PSO675G6422' => 'pso', 'PSO732G0003' => 'pso', 'PSO732G0386' => 'pso', 'PSO732G0448' => 'pso', 'PSO732G0606' => 'pso', 'PSO732G0796' => 'pso', 'PSO781G0299' => 'pso', 'PSO782G1201' => 'pso', 'PSO782G3135' => 'pso', 'QL03p073770' => 'qlo', 'QL05p011155' => 'qlo', 'QL07p036363' => 'qlo', 'QL08p051149' => 'qlo', 'QL08p051159' => 'qlo', 'QL08p051166' => 'qlo', 'QL09p001033' => 'qlo', 'QL10p050143' => 'qlo', 'QL11p003671' => 'qlo', 'QL11p003861' => 'qlo', 'RcHm_v2.0_Chr1g0351681' => 'rch', 'RcHm_v2.0_Chr1g0376211' => 'rch', 'RcHm_v2.0_Chr2g0157021' => 'rch', 'RcHm_v2.0_Chr3g0464071' => 'rch', 'RcHm_v2.0_Chr3g0493391' => 'rch', 'RcHm_v2.0_Chr4g0406591' => 'rch', 'RcHm_v2.0_Chr4g0437971' => 'rch', 'RcHm_v2.0_Chr5g0068991' => 'rch', 'RcHm_v2.0_Chr6g0249341' => 'rch', 'RcHm_v2.0_Chr6g0289391' => 'rch', 'RcHm_v2.0_Chr7g0194531' => 'rch', 'RcHm_v2.0_Chr7g0194641' => 'rch', 'RcHm_v2.0_Chr7g0194651' => 'rch', 'Rhsim01G0160600' => 'rsi', 'Rhsim01G0160700' => 'rsi', 'Rhsim02G0081400' => 'rsi', 'Rhsim03G0174700' => 'rsi', 'Rhsim05G0203100' => 'rsi', 'Rhsim08G0087000' => 'rsi', 'Rhsim09G0025300' => 'rsi', 'Rhsim09G0195100' => 'rsi', 'Rhsim12G0074100' => 'rsi', 'Sabra02G0119800' => 'sbr', 'Sabra04G0059900' => 'sbr', 'Sabra07G0105600' => 'sbr', 'Sabra08G0073500' => 'sbr', 'Sabra12G0099900' => 'sbr', 'Sabra15G0146900' => 'sbr', 'Sabra16G0106300' => 'sbr', 'Sabra17G0017600' => 'sbr', 'Sabra17G0106000' => 'sbr', 'Sabra19G0076700' => 'sbr', 'Sabra19G0080100' => 'sbr', 'SalBow2G1719' => 'sbo', 'SalBow2G2312' => 'sbo', 'SalBow3G3706' => 'sbo', 'SalBow3G4654' => 'sbo', 'SalBow4G3134' => 'sbo', 'SalBow6G0297' => 'sbo', 'SalBow6G1895' => 'sbo', 'SalBow6G4137' => 'sbo', 'Sc07g0006910' => 'sci', 'Sc14g0004870' => 'sci', 'Sc14g0007940' => 'sci', 'Sc25g0000310' => 'sci', 'Sc25g0002570' => 'sci', 'Sc25g0002580' => 'sci', 'Sed0004935' => 'sed', 'Sed0006732' => 'sed', 'Sed0010650' => 'sed', 'Sed0013885' => 'sed', 'Sed0015234' => 'sed', 'Sed0016640' => 'sed', 'Sed0019173' => 'sed', 'Sed0022075' => 'sed', 'Sed0022515' => 'sed', 'SEGI_01444' => 'sgi', 'SEGI_01492' => 'sgi', 'SEGI_03741' => 'sgi', 'SEGI_05381' => 'sgi', 'SEGI_09980' => 'sgi', 'SEGI_24398' => 'sgi', 'SEGI_28697' => 'sgi', 'SEGI_31446' => 'sgi', 'SEGI_34720' => 'sgi', 'SEGI_35827' => 'sgi', 'SGA_v2.0_scaffold12G06167' => 'sas', 'SGA_v2.0_scaffold16G07806' => 'sas', 'SGA_v2.0_scaffold17G08147' => 'sas', 'SGA_v2.0_scaffold49G18157' => 'sas', 'SGA_v2.0_scaffold94G28548' => 'sas', 'SHI23461' => 'shi', 'SMO141G0139' => 'smo', 'SMO141G0310' => 'smo', 'SMO142G0041' => 'smo', 'SMO146G0124' => 'smo', 'SMO307G0055' => 'smo', 'SMO358G0503' => 'smo', 'Solyc02g091490.4' => 'sly', 'Solyc03g006860.3' => 'sly', 'Solyc05g012100.3' => 'sly', 'Solyc06g073190.3' => 'sly', 'Solyc09g011850.4' => 'sly', 'Solyc10g017620.3' => 'sly', 'Solyc11g042850.2' => 'sly', 'Sopen02g036110' => 'spe', 'Sopen03g002850' => 'spe', 'Sopen05g006890' => 'spe', 'Sopen06g029560' => 'spe', 'Sopen09g006670' => 'spe', 'Sopen10g006550' => 'spe', 'Sopen11g019230' => 'spe', 'Sp1g04840' => 'spa', 'Sp4g13870' => 'spa', 'Sp5g03680' => 'spa', 'Sp5g08300' => 'spa', 'Sp5g21500' => 'spa', 'Sp5g24260' => 'spa', 'Sp6g07190' => 'spa', 'Sp6g14080' => 'spa', 'SpUn0372_0010' => 'spa', 'TAR291G0002' => 'tar', 'TAR362G0099' => 'tar', 'TAR371G1128' => 'tar', 'TAR371G1256' => 'tar', 'TAR374G1348' => 'tar', 'TAR375G0167' => 'tar', 'TAR376G0336' => 'tar', 'TAR381G0618' => 'tar', 'TAR623G0086' => 'tar', 'TAR623G0559' => 'tar', 'TAR623G0694' => 'tar', 'TAR624G0238' => 'tar', 'TAR636G0079' => 'tar', 'THA.LOC104798731' => 'tha', 'THA.LOC104800894' => 'tha', 'THA.LOC104803759' => 'tha', 'THA.LOC104805607' => 'tha', 'THA.LOC104805707' => 'tha', 'THA.LOC104806478' => 'tha', 'THA.LOC104822007' => 'tha', 'THA.LOC104826198' => 'tha', 'Thecc.02G327900' => 'tca', 'Thecc.03G166700' => 'tca', 'Thecc.03G166800' => 'tca', 'Thecc.04G119000' => 'tca', 'Thecc.04G177100' => 'tca', 'Thecc.05G024200' => 'tca', 'Thecc.08G176600' => 'tca', 'Thhalv10006096m.g' => 'esa', 'Thhalv10008196m.g' => 'esa', 'Thhalv10010328m.g' => 'esa', 'Thhalv10014000m.g' => 'esa', 'Thhalv10016928m.g' => 'esa', 'Thhalv10018377m.g' => 'esa', 'Thhalv10018694m.g' => 'esa', 'Thhalv10029371m.g' => 'esa', 'TPR.G16619' => 'tpr', 'TPR.G17389' => 'tpr', 'TPR.G18854' => 'tpr', 'TPR.G23064' => 'tpr', 'TPR.G23746' => 'tpr', 'TPR.G34216' => 'tpr', 'TPR.G3488' => 'tpr', 'TPR.G39298' => 'tpr', 'TWI14G1053' => 'twi', 'TWI15G0403' => 'twi', 'TWI18G1047' => 'twi', 'TWI39G0989' => 'twi', 'TWI59G1315' => 'twi', 'TWI63G0845' => 'twi', 'TWI74G0485' => 'twi', 'TWI74G0742' => 'twi', 'TWI75G1874' => 'twi', 'unitig_0.g2396' => 'ugi', 'unitig_0.g481' => 'ugi', 'unitig_18.g30051' => 'ugi', 'unitig_22.g6895' => 'ugi', 'unitig_578.g16258' => 'ugi', 'unitig_60.g25537' => 'ugi', 'unitig_746.g26589' => 'ugi', 'unitig_8.g4806' => 'ugi', 'unitig_8.g4807' => 'ugi', 'vmacro00646' => 'vma', 'vmacro01312' => 'vma', 'vmacro05840' => 'vma', 'vmacro06736' => 'vma', 'vmacro09871' => 'vma', 'vmacro18046' => 'vma', 'VMungo0331G0989' => 'vmu', 'VMungo0331G1398' => 'vmu', 'VMungo0464G2082' => 'vmu', 'VMungo0647G2063' => 'vmu', 'VMungo0647G2076' => 'vmu', 'VMungo0647G2178' => 'vmu', 'VMungo0720G0352' => 'vmu', 'VMungo0720G2701' => 'vmu', 'VMungo1080G1637' => 'vmu', 'VMungo1127G0308' => 'vmu', 'VMungo1215G1581' => 'vmu', 'VMungo1215G2800' => 'vmu', 'VMungo1383G1716' => 'vmu', 'Zm00001eb050040' => 'zma', 'Zm00001eb144910' => 'zma', 'Zm00001eb147840' => 'zma', 'Zm00001eb260710' => 'zma', 'Zm00001eb365810' => 'zma', 'Zm00001eb372200' => 'zma' ) $gf_id = 'HOM05D000559' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000559' ) $data_identifier = 'HOM05D000559' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 38, 'aar' => (int) 8, 'aag' => (int) 3, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 10, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 15, 'bca' => (int) 32, 'bol' => (int) 19, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 7, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 4, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 6, 'ccl' => (int) 8, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 7, 'cpa' => (int) 8, 'cre' => (int) 1, 'csa' => (int) 5, 'camsi' => (int) 15, 'dca' => (int) 7, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 36, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 17, 'gra' => (int) 10, 'vvi' => (int) 7, 'han' => (int) 8, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 13, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 11, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 10, 'osa' => (int) 5, 'pax' => (int) 10, 'pgr' => (int) 6, 'stu' => (int) 6, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 10, 'ppe' => (int) 8, 'psa' => (int) 11, 'pso' => (int) 28, 'qlo' => (int) 10, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 10, 'sas' => (int) 5, 'shi' => (int) 1, 'smo' => (int) 6, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 9, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb372200' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1